IL_7TOS_034
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AGAAUU*AGGAAU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOS_034 not in the Motif Atlas
- Homologous match to IL_4LFB_030
- Geometric discrepancy: 0.1215
- The information below is about IL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
7TOS|1|16S|A|673
7TOS|1|16S|G|674
7TOS|1|16S|A|675
7TOS|1|16S|A|676
7TOS|1|16S|U|677
7TOS|1|16S|U|678
*
7TOS|1|16S|A|712
7TOS|1|16S|G|713
7TOS|1|16S|G|714
7TOS|1|16S|A|715
7TOS|1|16S|A|716
7TOS|1|16S|U|717
Current chains
- Chain 16S
- 16S ribosomal RNA
Nearby chains
- Chain L02
- 50S ribosomal protein L2
- Chain S06
- 30S ribosomal protein S6, non-modified isoform
- Chain S11
- 30S ribosomal protein S11
- Chain S18
- 30S ribosomal protein S18
- Chain S21
- Ribosomal protein S21
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