IL_7TOS_071
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGAACUG*CUAAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOS_071 not in the Motif Atlas
- Geometric match to IL_7A0S_006
- Geometric discrepancy: 0.1041
- The information below is about IL_7A0S_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.2
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
7TOS|1|23S|G|188
7TOS|1|23S|G|189
7TOS|1|23S|A|190
7TOS|1|23S|A|191
7TOS|1|23S|C|192
7TOS|1|23S|U|193
7TOS|1|23S|G|194
*
7TOS|1|23S|C|201
7TOS|1|23S|U|202
7TOS|1|23S|A|203
7TOS|1|23S|A|204
7TOS|1|23S|G|205
7TOS|1|23S|U|206
7TOS|1|23S|A|207
7TOS|1|23S|C|208
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain L15
- 50S ribosomal protein L15
- Chain L28
- 50S ribosomal protein L28
- Chain L34
- 50S ribosomal protein L34
- Chain L35
- 50S ribosomal protein L35
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