IL_7TOS_075

3D structure

PDB id

7TOS (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UAG*CAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7TOS_075 not in the Motif Atlas

Geometric match to IL_5J7L_254

Geometric discrepancy: 0.1259

The information below is about IL_5J7L_254

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.3

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

7TOS|1|23S|U|293
7TOS|1|23S|A|294
7TOS|1|23S|G|295
*
7TOS|1|23S|C|343
7TOS|1|23S|A|344
7TOS|1|23S|A|345
7TOS|1|23S|A|346
7TOS|1|23S|A|347

Current chains

Chain 23S

23S ribosomal RNA

Nearby chains

Chain L24

Ribosomal protein L24