IL_7TOS_086
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 7TOS|1|23S|G|776, 7TOS|1|23S|A|788, 7TOS|1|23S|A|789
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOS_086 not in the Motif Atlas
- Geometric match to IL_5J7L_265
- Geometric discrepancy: 0.0899
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7TOS|1|23S|G|775
7TOS|1|23S|G|776
7TOS|1|23S|G|777
*
7TOS|1|23S|C|787
7TOS|1|23S|A|788
7TOS|1|23S|A|789
7TOS|1|23S|U|790
7TOS|1|23S|C|791
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain L02
- 50S ribosomal protein L2
- Chain L04
- 50S ribosomal protein L4
- Chain L22
- 50S ribosomal protein L22
- Chain L34
- 50S ribosomal protein L34
- Chain PR
- PR20, ALS/FTD dipeptide repeat protein
Coloring options: