IL_7TOS_113
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUAAG*CGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOS_113 not in the Motif Atlas
- Geometric match to IL_5J7L_292
- Geometric discrepancy: 0.1349
- The information below is about IL_5J7L_292
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- UAA/GAN
- Motif group
- IL_89021.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
7TOS|1|23S|C|1351
7TOS|1|23S|U|1352
7TOS|1|23S|A|1353
7TOS|1|23S|A|1354
7TOS|1|23S|G|1355
*
7TOS|1|23S|C|1376
7TOS|1|23S|G|1377
7TOS|1|23S|A|1378
7TOS|1|23S|U|1379
7TOS|1|23S|G|1380
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain L02
- 50S ribosomal protein L2
- Chain L34
- 50S ribosomal protein L34
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