IL_7TOS_166
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCACU*AAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOS_166 not in the Motif Atlas
- Geometric match to IL_1KOG_007
- Geometric discrepancy: 0.1575
- The information below is about IL_1KOG_007
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
7TOS|1|23S|U|2680
7TOS|1|23S|C|2681
7TOS|1|23S|A|2682
7TOS|1|23S|C|2683
7TOS|1|23S|U|2684
*
7TOS|1|23S|A|2725
7TOS|1|23S|A|2726
7TOS|1|23S|A|2727
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain L03
- 50S ribosomal protein L3
- Chain L14
- 50S ribosomal protein L14
- Chain L17
- 50S ribosomal protein L17
- Chain L19
- 50S ribosomal protein L19
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