IL_7TQL_094
3D structure
- PDB id
- 7TQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of the human 40S small ribosomal subunit in complex with translation initiation factors eIF1A and eIF5B.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GACAGGAUUG*CUCGAUUC
- Length
- 18 nucleotides
- Bulged bases
- 7TQL|1|2|G|1285
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TQL_094 not in the Motif Atlas
- Homologous match to IL_8P9A_470
- Geometric discrepancy: 0.2817
- The information below is about IL_8P9A_470
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28304.1
- Basepair signature
- cWW-R-L-R-L-R-L-R-L-L-L-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
7TQL|1|2|G|1281
7TQL|1|2|A|1282
7TQL|1|2|C|1283
7TQL|1|2|A|1284
7TQL|1|2|G|1285
7TQL|1|2|G|1286
7TQL|1|2|A|1287
7TQL|1|2|U|1288
7TQL|1|2|U|1289
7TQL|1|2|G|1290
*
7TQL|1|2|C|1309
7TQL|1|2|U|1310
7TQL|1|2|C|1311
7TQL|1|2|G|1312
7TQL|1|2|A|1313
7TQL|1|2|U|1314
7TQL|1|2|U|1315
7TQL|1|2|C|1316
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain M
- 40S ribosomal protein S10
- Chain O
- ribosomal protein eS12
- Chain f
- ribosomal protein uS14
- Chain g
- 40S ribosomal protein S27a
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