IL_7TTU_097
3D structure
- PDB id
- 7TTU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUCG*UUCC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TTU_097 not in the Motif Atlas
- Geometric match to IL_5C5W_001
- Geometric discrepancy: 0.233
- The information below is about IL_5C5W_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_77658.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
7TTU|1|2|G|77
7TTU|1|2|U|78
7TTU|1|2|C|79
7TTU|1|2|G|80
*
7TTU|1|2|U|89
7TTU|1|2|U|90
7TTU|1|2|C|91
7TTU|1|2|C|92
Current chains
- Chain 2
- 5S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain H
- 50S ribosomal protein L25
- Chain M
- 50S ribosomal protein L30
- Chain Y
- 50S ribosomal protein L16
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