IL_7TUT_069
3D structure
- PDB id
- 7TUT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the multipass translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.88 Å
Loop
- Sequence
- CGCCCGAU*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TUT_069 not in the Motif Atlas
- Homologous match to IL_8C3A_052
- Geometric discrepancy: 0.1769
- The information below is about IL_8C3A_052
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_84902.1
- Basepair signature
- cWW-L-cWW-L-L-R-cHH
- Number of instances in this motif group
- 2
Unit IDs
7TUT|1|K|C|1911
7TUT|1|K|G|1912
7TUT|1|K|C|1913
7TUT|1|K|C|1914
7TUT|1|K|C|1915
7TUT|1|K|G|1916
7TUT|1|K|A|1917
7TUT|1|K|U|1918
*
7TUT|1|K|G|2064
7TUT|1|K|G|2065
Current chains
- Chain K
- 28S ribosomal RNA
Nearby chains
- Chain F
- 60S ribosomal protein L7
- Chain O
- uL13
- Chain S
- eL20
- Chain f
- eL33
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