IL_7TUT_136
3D structure
- PDB id
- 7TUT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome stalled on a 4-TMD Rhodopsin intermediate in complex with the multipass translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.88 Å
Loop
- Sequence
- CUCAGUAC*GGAACCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TUT_136 not in the Motif Atlas
- Geometric match to IL_5TBW_116
- Geometric discrepancy: 0.1194
- The information below is about IL_5TBW_116
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.8
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
7TUT|1|K|C|4596
7TUT|1|K|U|4597
7TUT|1|K|C|4598
7TUT|1|K|A|4599
7TUT|1|K|G|4600
7TUT|1|K|U|4601
7TUT|1|K|A|4602
7TUT|1|K|C|4603
*
7TUT|1|K|G|4608
7TUT|1|K|G|4609
7TUT|1|K|A|4610
7TUT|1|K|A|4611
7TUT|1|K|C|4612
7TUT|1|K|C|4613
7TUT|1|K|G|4614
Current chains
- Chain K
- 28S ribosomal RNA
Nearby chains
- Chain H
- 60S ribosomal protein L9
- Chain V
- Ribosomal protein L23
- Chain m
- Ubiquitin A-52 residue ribosomal protein fusion product 1
- Chain w
- uL3
Coloring options: