IL_7UCK_282

3D structure

PDB id

7UCK (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S translation initiation complex with ac4c(-1) mRNA and Harringtonine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CUGAAUG*CGCG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UCK|1|5|C|3708
7UCK|1|5|U|3709
7UCK|1|5|G|3710
7UCK|1|5|A|3711
7UCK|1|5|A|3712
7UCK|1|5|U|3713
7UCK|1|5|G|3714
*
7UCK|1|5|C|3739
7UCK|1|5|G|3740
7UCK|1|5|C|3741
7UCK|1|5|G|3742

Current chains

Chain 5

28s rRNA

Nearby chains

Chain 9

Small subunit ribosomal RNA; SSU rRNA

Chain A

60S ribosomal protein L8