IL_7UG7_146

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

AGCCU*AUGUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UG7_146 not in the Motif Atlas

Geometric match to IL_5BTM_001

Geometric discrepancy: 0.296

The information below is about IL_5BTM_001

Detailed Annotation

Triple non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71154.1

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

10

Unit IDs

7UG7|1|23|A|2101
7UG7|1|23|G|2102
7UG7|1|23|C|2103
7UG7|1|23|C|2104
7UG7|1|23|U|2105
*
7UG7|1|23|A|2184
7UG7|1|23|U|2185
7UG7|1|23|G|2186
7UG7|1|23|U|2187
7UG7|1|23|U|2188

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LA

50S ribosomal protein L1