IL_7UNR_067

3D structure

PDB id

7UNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAAG*CGUAAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNR_067 not in the Motif Atlas

Geometric match to IL_5J7L_063

Geometric discrepancy: 0.3677

The information below is about IL_5J7L_063

Detailed Annotation

Triple sheared related

Broad Annotation

Triple sheared

Motif group

IL_80231.1

Basepair signature

cWW-L-R-L-R-L-R-tHS-cWW

Number of instances in this motif group

2

Unit IDs

7UNR|1|A|U|1708
7UNR|1|A|G|1709
7UNR|1|A|A|1710
7UNR|1|A|A|1711
7UNR|1|A|G|1712
*
7UNR|1|A|C|1722
7UNR|1|A|G|1723
7UNR|1|A|U|1724
7UNR|1|A|A|1725
7UNR|1|A|A|1726
7UNR|1|A|G|1727

Current chains

Chain A

23S Ribosomal RNA

Nearby chains