IL_7UNR_129
3D structure
- PDB id
- 7UNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUUAG*CGACGAUC
- Length
- 14 nucleotides
- Bulged bases
- 7UNR|1|a|U|238, 7UNR|1|a|C|274
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UNR_129 not in the Motif Atlas
- Homologous match to IL_4LFB_011
- Geometric discrepancy: 0.1063
- The information below is about IL_4LFB_011
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_46174.3
- Basepair signature
- cWW-cSS-tSS-tSH-L-cWW-tHW-cWW
- Number of instances in this motif group
- 5
Unit IDs
7UNR|1|a|G|236
7UNR|1|a|A|237
7UNR|1|a|U|238
7UNR|1|a|U|239
7UNR|1|a|A|240
7UNR|1|a|G|241
*
7UNR|1|a|C|271
7UNR|1|a|G|272
7UNR|1|a|A|273
7UNR|1|a|C|274
7UNR|1|a|G|275
7UNR|1|a|A|276
7UNR|1|a|U|277
7UNR|1|a|C|278
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain q
- 30S ribosomal protein S17
Coloring options: