IL_7UNU_004
3D structure
- PDB id
- 7UNU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGGAG*CUUUGAUC
- Length
- 13 nucleotides
- Bulged bases
- 7UNU|1|A|U|101
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UNU_004 not in the Motif Atlas
- Geometric match to IL_6UFG_001
- Geometric discrepancy: 0.1617
- The information below is about IL_6UFG_001
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_01488.3
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
7UNU|1|A|G|81
7UNU|1|A|G|82
7UNU|1|A|G|83
7UNU|1|A|A|84
7UNU|1|A|G|85
*
7UNU|1|A|C|98
7UNU|1|A|U|99
7UNU|1|A|U|100
7UNU|1|A|U|101
7UNU|1|A|G|102
7UNU|1|A|A|103
7UNU|1|A|U|104
7UNU|1|A|C|105
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L29
- Chain W
- 50S ribosomal protein L24
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