IL_7UNU_042

3D structure

PDB id

7UNU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUG*CACC

Length

8 nucleotides

Bulged bases

7UNU|1|A|U|1051

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNU_042 not in the Motif Atlas

Geometric match to IL_5D8H_002

Geometric discrepancy: 0.1103

The information below is about IL_5D8H_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28482.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

7UNU|1|A|G|1049
7UNU|1|A|U|1050
7UNU|1|A|U|1051
7UNU|1|A|G|1052
*
7UNU|1|A|C|1066
7UNU|1|A|A|1067
7UNU|1|A|C|1068
7UNU|1|A|C|1069

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain J

50S ribosomal protein L11

Chain O

50S ribosomal protein L16