IL_7UNU_061

3D structure

PDB id

7UNU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNU_061 not in the Motif Atlas

Geometric match to IL_5J7L_303

Geometric discrepancy: 0.1287

The information below is about IL_5J7L_303

Detailed Annotation

UAA/GAN variation

Broad Annotation

UAA/GAN variation

Motif group

IL_23774.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

11

Unit IDs

7UNU|1|A|C|1513
7UNU|1|A|G|1514
7UNU|1|A|A|1515
7UNU|1|A|G|1516
*
7UNU|1|A|C|1532
7UNU|1|A|G|1533
7UNU|1|A|A|1534
7UNU|1|A|A|1535
7UNU|1|A|G|1536

Current chains

Chain A

23S Ribosomal RNA

Nearby chains