IL_7UNU_169

3D structure

PDB id

7UNU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUG*CUAAUC

Length

10 nucleotides

Bulged bases

7UNU|1|a|U|1251, 7UNU|1|a|A|1274

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNU_169 not in the Motif Atlas

Homologous match to IL_4LFB_052

Geometric discrepancy: 0.1759

The information below is about IL_4LFB_052

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_08849.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7UNU|1|a|G|1249
7UNU|1|a|U|1250
7UNU|1|a|U|1251
7UNU|1|a|G|1252
*
7UNU|1|a|C|1271
7UNU|1|a|U|1272
7UNU|1|a|A|1273
7UNU|1|a|A|1274
7UNU|1|a|U|1275
7UNU|1|a|C|1276

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain j

30S ribosomal protein S10

Chain n

30S ribosomal protein S14