IL_7UNU_182

3D structure

PDB id

7UNU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNU_182 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.1008

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7UNU|1|A|U|1838
7UNU|1|A|U|1839
7UNU|1|A|A|1840
7UNU|1|A|A|1841
7UNU|1|A|U|1842
7UNU|1|A|U|1843
7UNU|1|A|G|1844
7UNU|1|A|A|1845
7UNU|1|A|U|1846
7UNU|1|A|G|1847
*
7UNU|1|A|U|1869
7UNU|1|A|U|1870
7UNU|1|A|G|1871
7UNU|1|A|A|1872
7UNU|1|A|U|1873
7UNU|1|A|C|1874
7UNU|1|A|G|1875
7UNU|1|A|A|1876
7UNU|1|A|A|1877
7UNU|1|A|G|1878

Current chains

Chain A

23S Ribosomal RNA

Nearby chains