IL_7UNV_055

3D structure

PDB id

7UNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUAG*UGAUG

Length

9 nucleotides

Bulged bases

7UNV|1|A|U|1544

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNV_055 not in the Motif Atlas

Geometric match to IL_7RQB_057

Geometric discrepancy: 0.1383

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7UNV|1|A|C|1424
7UNV|1|A|U|1425
7UNV|1|A|A|1426
7UNV|1|A|G|1427
*
7UNV|1|A|U|1541
7UNV|1|A|G|1542
7UNV|1|A|A|1543
7UNV|1|A|U|1544
7UNV|1|A|G|1545

Current chains

Chain A

23S Ribosomal RNA

Nearby chains