IL_7UNV_061

3D structure

PDB id

7UNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UNV_061 not in the Motif Atlas

Geometric match to IL_5J7L_303

Geometric discrepancy: 0.1169

The information below is about IL_5J7L_303

Detailed Annotation

UAA/GAN variation

Broad Annotation

UAA/GAN variation

Motif group

IL_23774.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

11

Unit IDs

7UNV|1|A|C|1513
7UNV|1|A|G|1514
7UNV|1|A|A|1515
7UNV|1|A|G|1516
*
7UNV|1|A|C|1532
7UNV|1|A|G|1533
7UNV|1|A|A|1534
7UNV|1|A|A|1535
7UNV|1|A|G|1536

Current chains

Chain A

23S Ribosomal RNA

Nearby chains