IL_7UNV_100
3D structure
- PDB id
- 7UNV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UNV_100 not in the Motif Atlas
- Geometric match to IL_5J7L_346
- Geometric discrepancy: 0.0721
- The information below is about IL_5J7L_346
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.4
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7UNV|1|A|C|2639
7UNV|1|A|U|2640
7UNV|1|A|A|2641
7UNV|1|A|G|2642
7UNV|1|A|U|2643
7UNV|1|A|A|2644
7UNV|1|A|C|2645
*
7UNV|1|A|G|2650
7UNV|1|A|G|2651
7UNV|1|A|A|2652
7UNV|1|A|C|2653
7UNV|1|A|C|2654
7UNV|1|A|G|2655
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain G
- 50S ribosomal protein L6
- Chain x
- Translation initiation factor IF-2
Coloring options: