IL_7UPH_009
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- GAAA*UGC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_009 not in the Motif Atlas
- Homologous match to IL_5J7L_009
- Geometric discrepancy: 0.2173
- The information below is about IL_5J7L_009
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
7UPH|1|I|G|127
7UPH|1|I|A|128
7UPH|1|I|A|129
7UPH|1|I|A|130
*
7UPH|1|I|U|230
7UPH|1|I|G|231
7UPH|1|I|C|232
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain C
- 30S ribosomal protein S16
- Chain D
- 30S ribosomal protein S17
Coloring options: