IL_7UPH_012
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 7UPH|1|I|U|172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_012 not in the Motif Atlas
- Homologous match to IL_5J7L_012
- Geometric discrepancy: 0.2398
- The information below is about IL_5J7L_012
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.6
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7UPH|1|I|G|146
7UPH|1|I|G|147
7UPH|1|I|A|148
7UPH|1|I|U|149
7UPH|1|I|A|150
7UPH|1|I|A|151
7UPH|1|I|C|152
*
7UPH|1|I|G|167
7UPH|1|I|C|168
7UPH|1|I|U|169
7UPH|1|I|A|170
7UPH|1|I|A|171
7UPH|1|I|U|172
7UPH|1|I|A|173
7UPH|1|I|C|174
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain G
- 30S ribosomal protein S20
Coloring options: