IL_7UPH_033
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- AGAAUU*AGGAAU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_033 not in the Motif Atlas
- Homologous match to IL_4LFB_030
- Geometric discrepancy: 0.2754
- The information below is about IL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
7UPH|1|I|A|672
7UPH|1|I|G|673
7UPH|1|I|A|674
7UPH|1|I|A|675
7UPH|1|I|U|676
7UPH|1|I|U|677
*
7UPH|1|I|A|711
7UPH|1|I|G|712
7UPH|1|I|G|713
7UPH|1|I|A|714
7UPH|1|I|A|715
7UPH|1|I|U|716
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain E
- 30S ribosomal protein S18
- Chain H
- 30S ribosomal protein S21
- Chain a
- 30S ribosomal protein S6
- Chain f
- 30S ribosomal protein S11
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