IL_7UPH_036
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- CAAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_036 not in the Motif Atlas
- Homologous match to IL_4LFB_033
- Geometric discrepancy: 0.2602
- The information below is about IL_4LFB_033
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
7UPH|1|I|C|778
7UPH|1|I|A|779
7UPH|1|I|A|780
7UPH|1|I|A|781
7UPH|1|I|C|782
*
7UPH|1|I|G|798
7UPH|1|I|G|799
7UPH|1|I|U|800
7UPH|1|I|A|801
7UPH|1|I|G|802
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain H
- 30S ribosomal protein S21
- Chain f
- 30S ribosomal protein S11
Coloring options: