IL_7UPH_042
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- GUC*GAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_042 not in the Motif Atlas
- Geometric match to IL_5Z1I_003
- Geometric discrepancy: 0.2843
- The information below is about IL_5Z1I_003
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_31737.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
7UPH|1|I|G|987
7UPH|1|I|U|988
7UPH|1|I|C|989
*
7UPH|1|I|G|1214
7UPH|1|I|A|1215
7UPH|1|I|C|1216
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain A
- 30S ribosomal protein S14
- Chain F
- 30S ribosomal protein S19
Coloring options: