IL_7UPH_049
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- GUUGC*GAACUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_049 not in the Motif Atlas
- Homologous match to IL_5J7L_051
- Geometric discrepancy: 0.2738
- The information below is about IL_5J7L_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06691.1
- Basepair signature
- cWW-cWS-L-R-L-R-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7UPH|1|I|G|1123
7UPH|1|I|U|1124
7UPH|1|I|U|1125
7UPH|1|I|G|1126
7UPH|1|I|C|1127
*
7UPH|1|I|G|1143
7UPH|1|I|A|1144
7UPH|1|I|A|1145
7UPH|1|I|C|1146
7UPH|1|I|U|1147
7UPH|1|I|C|1148
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain d
- 30S ribosomal protein S9
- Chain e
- 30S ribosomal protein S10
Coloring options: