IL_7UPH_106

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

GUUG*CAUC

Length

8 nucleotides

Bulged bases

7UPH|1|I|U|2555

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UPH_106 not in the Motif Atlas

Geometric match to IL_1MMS_001

Geometric discrepancy: 0.2407

The information below is about IL_1MMS_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_92446.2

Basepair signature

cWW-cWW-R-L-L

Number of instances in this motif group

5

Unit IDs

7UPH|1|I|G|2553
7UPH|1|I|U|2554
7UPH|1|I|U|2555
7UPH|1|I|G|2556
*
7UPH|1|I|C|2570
7UPH|1|I|A|2571
7UPH|1|I|U|2572
7UPH|1|I|C|2573

Current chains

Chain I

Tethered rRNA

Nearby chains