IL_7UPH_121

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

UAAG*UGAUG

Length

9 nucleotides

Bulged bases

7UPH|1|I|U|3017

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UPH_121 not in the Motif Atlas

Geometric match to IL_5J7L_299

Geometric discrepancy: 0.2943

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7UPH|1|I|U|2962
7UPH|1|I|A|2963
7UPH|1|I|A|2964
7UPH|1|I|G|2965
*
7UPH|1|I|U|3014
7UPH|1|I|G|3015
7UPH|1|I|A|3016
7UPH|1|I|U|3017
7UPH|1|I|G|3018

Current chains

Chain I

Tethered rRNA

Nearby chains