IL_7UPH_127
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- GAA*UCC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_127 not in the Motif Atlas
- Geometric match to IL_5J7L_305
- Geometric discrepancy: 0.3989
- The information below is about IL_5J7L_305
- Detailed Annotation
- Isolated tWW turn
- Broad Annotation
- No text annotation
- Motif group
- IL_67095.2
- Basepair signature
- cWW-tWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
7UPH|1|I|G|3157
7UPH|1|I|A|3158
7UPH|1|I|A|3159
*
7UPH|1|I|U|3489
7UPH|1|I|C|3490
7UPH|1|I|C|3491
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L3
- Chain S
- 50S ribosomal protein L14
- Chain o
- 50S ribosomal protein L19
Coloring options: