IL_7UPH_142
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- CCC*G(2MG)G
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_142 not in the Motif Atlas
- Geometric match to IL_4LFB_061
- Geometric discrepancy: 0.1472
- The information below is about IL_4LFB_061
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
7UPH|1|I|C|3558
7UPH|1|I|C|3559
7UPH|1|I|C|3560
*
7UPH|1|I|G|3938
7UPH|1|I|2MG|3939
7UPH|1|I|G|3940
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain M
- 50S ribosomal protein L4
- Chain T
- 50S ribosomal protein L15
Coloring options: