IL_7UVW_054

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

AUGUAGG*CUGAGAU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7UVW_054 not in the Motif Atlas

Geometric match to IL_3NDB_008

Geometric discrepancy: 0.3546

The information below is about IL_3NDB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65851.3

Basepair signature

cWW-cWW-cWW-cWW-R-tHW-tSH-tHS-L

Number of instances in this motif group

2

Unit IDs

7UVW|1|A|A|1468
7UVW|1|A|U|1469
7UVW|1|A|G|1470
7UVW|1|A|U|1471
7UVW|1|A|A|1472
7UVW|1|A|G|1473
7UVW|1|A|G|1474
*
7UVW|1|A|C|1508
7UVW|1|A|U|1509
7UVW|1|A|G|1510
7UVW|1|A|A|1511
7UVW|1|A|G|1512
7UVW|1|A|A|1513
7UVW|1|A|U|1514

Current chains

Chain A

23s ribosomal RNA

Nearby chains