IL_7V08_148
3D structure
- PDB id
- 7V08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.36 Å
Loop
- Sequence
- AAUAA(OMU)G*C(OMU)A(PSU)
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7V08_148 not in the Motif Atlas
- Homologous match to IL_8C3A_080
- Geometric discrepancy: 0.1992
- The information below is about IL_8C3A_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49460.3
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
7V08|1|1|A|1883
7V08|1|1|A|1884
7V08|1|1|U|1885
7V08|1|1|A|1886
7V08|1|1|A|1887
7V08|1|1|OMU|1888
7V08|1|1|G|1889
*
7V08|1|1|C|2346
7V08|1|1|OMU|2347
7V08|1|1|A|2348
7V08|1|1|PSU|2349
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain P
- 60S ribosomal protein L17-A
- Chain d
- 60S ribosomal protein L31-A
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