IL_7V2M_015
3D structure
- PDB id
- 7V2M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K1k4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GCAAUG*UGAC
- Length
- 10 nucleotides
- Bulged bases
- 7V2M|1|A|G|384
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7V2M_015 not in the Motif Atlas
- Geometric match to IL_4V88_408
- Geometric discrepancy: 0.2454
- The information below is about IL_4V88_408
- Detailed Annotation
- C-loop with extra cWW pair
- Broad Annotation
- C-loop
- Motif group
- IL_11347.2
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
7V2M|1|A|G|367
7V2M|1|A|C|368
7V2M|1|A|A|369
7V2M|1|A|A|370
7V2M|1|A|U|371
7V2M|1|A|G|372
*
7V2M|1|A|U|383
7V2M|1|A|G|384
7V2M|1|A|A|385
7V2M|1|A|C|386
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain P
- 30S ribosomal protein S16
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