IL_7V2O_047
3D structure
- PDB id
- 7V2O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophilus 30S ribosome with KsgA, class K4
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAUG*CUAAUC
- Length
- 10 nucleotides
- Bulged bases
- 7V2O|1|A|U|1239, 7V2O|1|A|A|1262, 7V2O|1|A|U|1263
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7V2O_047 not in the Motif Atlas
- Homologous match to IL_5J7L_055
- Geometric discrepancy: 0.1887
- The information below is about IL_5J7L_055
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.2
- Basepair signature
- cWW-cSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7V2O|1|A|G|1237
7V2O|1|A|A|1238
7V2O|1|A|U|1239
7V2O|1|A|G|1240
*
7V2O|1|A|C|1259
7V2O|1|A|U|1260
7V2O|1|A|A|1261
7V2O|1|A|A|1262
7V2O|1|A|U|1263
7V2O|1|A|C|1264
Current chains
- Chain A
- 16s ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S3
- Chain J
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14 type Z
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