IL_7WTQ_049
3D structure
- PDB id
- 7WTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-2 (without Rps2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUCAG*CUUGGAUU
- Length
- 13 nucleotides
- Bulged bases
- 7WTQ|1|C2|G|913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WTQ_049 not in the Motif Atlas
- Geometric match to IL_7A0S_004
- Geometric discrepancy: 0.2717
- The information below is about IL_7A0S_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_94910.1
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
7WTQ|1|C2|G|895
7WTQ|1|C2|U|896
7WTQ|1|C2|C|897
7WTQ|1|C2|A|898
7WTQ|1|C2|G|899
*
7WTQ|1|C2|C|910
7WTQ|1|C2|U|911
7WTQ|1|C2|U|912
7WTQ|1|C2|G|913
7WTQ|1|C2|G|914
7WTQ|1|C2|A|915
7WTQ|1|C2|U|916
7WTQ|1|C2|U|917
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain SB
- 40S ribosomal protein S1-A
- Chain SO
- 40S ribosomal protein S14-A
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