IL_7WTR_064
3D structure
- PDB id
- 7WTR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UAC*GAA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WTR_064 not in the Motif Atlas
- Geometric match to IL_4E5C_001
- Geometric discrepancy: 0.2063
- The information below is about IL_4E5C_001
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10167.6
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 51
Unit IDs
7WTR|1|C2|U|1650
7WTR|1|C2|A|1651
7WTR|1|C2|C|1652
*
7WTR|1|C2|G|1748
7WTR|1|C2|A|1749
7WTR|1|C2|A|1750
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain CC
- Ribosome biogenesis protein TSR1
- Chain SX
- 40S ribosomal protein S23-A
Coloring options: