IL_7WTT_081

3D structure

PDB id

7WTT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (with CK1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGCU*AAAAG

Length

9 nucleotides

Bulged bases

7WTT|1|2|A|1825

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7WTT|1|2|C|1708
7WTT|1|2|G|1709
7WTT|1|2|C|1710
7WTT|1|2|U|1711
*
7WTT|1|2|A|1822
7WTT|1|2|A|1823
7WTT|1|2|A|1824
7WTT|1|2|A|1825
7WTT|1|2|G|1826

Current chains

Chain 2

18S rRNA

Nearby chains

Chain t

Protein LTV1 homolog

Chain u

Pre-rRNA-processing protein TSR1 homolog