IL_7WTU_026
3D structure
- PDB id
- 7WTU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (without CK1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CCACU*AG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WTU_026 not in the Motif Atlas
- Geometric match to IL_5J7L_018
- Geometric discrepancy: 0.1197
- The information below is about IL_5J7L_018
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_03109.3
- Basepair signature
- cWW-cWS-tWH-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
7WTU|1|2|C|491
7WTU|1|2|C|492
7WTU|1|2|A|493
7WTU|1|2|C|494
7WTU|1|2|U|495
*
7WTU|1|2|A|508
7WTU|1|2|G|509
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain E
- 40S ribosomal protein S4, X isoform
- Chain J
- 40S ribosomal protein S9
- Chain Y
- 40S ribosomal protein S24
Coloring options: