IL_7WTU_076
3D structure
- PDB id
- 7WTU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (without CK1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UAC*GCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WTU_076 not in the Motif Atlas
- Geometric match to IL_5AOX_001
- Geometric discrepancy: 0.1727
- The information below is about IL_5AOX_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
7WTU|1|2|U|1560
7WTU|1|2|A|1561
7WTU|1|2|C|1562
*
7WTU|1|2|G|1573
7WTU|1|2|C|1574
7WTU|1|2|G|1575
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain K
- RRP12-like protein
- Chain T
- 40S ribosomal protein S19
Coloring options: