IL_7WTZ_021
3D structure
- PDB id
- 7WTZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UAUCAA*UGACCACG
- Length
- 14 nucleotides
- Bulged bases
- 7WTZ|1|2|U|361, 7WTZ|1|2|C|399
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WTZ_021 not in the Motif Atlas
- Geometric match to IL_4V88_402
- Geometric discrepancy: 0.0754
- The information below is about IL_4V88_402
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_45067.5
- Basepair signature
- cWW-tSH-tSS-tHS-R-cWW-cWW-R
- Number of instances in this motif group
- 16
Unit IDs
7WTZ|1|2|U|359
7WTZ|1|2|A|360
7WTZ|1|2|U|361
7WTZ|1|2|C|362
7WTZ|1|2|A|363
7WTZ|1|2|A|364
*
7WTZ|1|2|U|396
7WTZ|1|2|G|397
7WTZ|1|2|A|398
7WTZ|1|2|C|399
7WTZ|1|2|C|400
7WTZ|1|2|A|401
7WTZ|1|2|C|402
7WTZ|1|2|G|403
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain I
- 40S ribosomal protein S8
- Chain L
- 40S ribosomal protein S11
- Chain X
- 40S ribosomal protein S23
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