IL_7WU0_059
3D structure
- PDB id
- 7WU0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-B3
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGAGUAUG*UGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WU0_059 not in the Motif Atlas
- Geometric match to IL_4LFB_034
- Geometric discrepancy: 0.0873
- The information below is about IL_4LFB_034
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_84044.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
7WU0|1|2|G|1168
7WU0|1|2|G|1169
7WU0|1|2|A|1170
7WU0|1|2|G|1171
7WU0|1|2|U|1172
7WU0|1|2|A|1173
7WU0|1|2|U|1174
7WU0|1|2|G|1175
*
7WU0|1|2|U|1186
7WU0|1|2|G|1187
7WU0|1|2|A|1188
7WU0|1|2|A|1189
7WU0|1|2|A|1190
7WU0|1|2|C|1191
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain X
- 40S ribosomal protein S23
- Chain t
- Protein LTV1 homolog
- Chain v
- Serine/threonine-protein kinase RIO2
Coloring options: