IL_7Z20_043
3D structure
- PDB id
- 7Z20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- CCCAGACAG*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 7Z20|1|b|A|1045
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Z20_043 not in the Motif Atlas
- Geometric match to IL_5J7L_284
- Geometric discrepancy: 0.1055
- The information below is about IL_5J7L_284
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.2
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
7Z20|1|b|C|1042
7Z20|1|b|C|1043
7Z20|1|b|C|1044
7Z20|1|b|A|1045
7Z20|1|b|G|1046
7Z20|1|b|A|1047
7Z20|1|b|C|1048
7Z20|1|b|A|1049
7Z20|1|b|G|1050
*
7Z20|1|b|U|1107
7Z20|1|b|C|1108
7Z20|1|b|G|1109
7Z20|1|b|A|1110
7Z20|1|b|G|1111
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain g
- 50S ribosomal protein L6
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