IL_7Z34_022

3D structure

PDB id

7Z34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of pre-60S particle bound to DRG1(AFG2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGG*UGCAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z34_022 not in the Motif Atlas

Homologous match to IL_8C3A_025

Geometric discrepancy: 0.176

The information below is about IL_8C3A_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_07235.3

Basepair signature

cWW-tSH-L-tHS-cWW

Number of instances in this motif group

8

Unit IDs

7Z34|1|1|G|725
7Z34|1|1|G|726
7Z34|1|1|G|727
7Z34|1|1|G|728
*
7Z34|1|1|U|741
7Z34|1|1|G|742
7Z34|1|1|C|743
7Z34|1|1|A|744
7Z34|1|1|C|745

Current chains

Chain 1

35S pre-ribosomal RNA

Nearby chains

Chain Q

60S ribosomal protein L18-A

Chain o

60S ribosomal protein L29