IL_7Z34_040
3D structure
- PDB id
- 7Z34 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of pre-60S particle bound to DRG1(AFG2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UGCCGGAAUA*UUA
- Length
- 13 nucleotides
- Bulged bases
- 7Z34|1|1|U|1181
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Z34_040 not in the Motif Atlas
- Geometric match to IL_1RPU_001
- Geometric discrepancy: 0.2401
- The information below is about IL_1RPU_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.4
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 215
Unit IDs
7Z34|1|1|U|1173
7Z34|1|1|G|1174
7Z34|1|1|C|1175
7Z34|1|1|C|1176
7Z34|1|1|G|1177
7Z34|1|1|G|1178
7Z34|1|1|A|1179
7Z34|1|1|A|1180
7Z34|1|1|U|1181
7Z34|1|1|A|1182
*
7Z34|1|1|U|1324
7Z34|1|1|U|1325
7Z34|1|1|A|1326
Current chains
- Chain 1
- 35S pre-ribosomal RNA
Nearby chains
- Chain F
- 60S ribosomal protein L7-A
- Chain O
- 60S ribosomal protein L16-A
- Chain S
- 60S ribosomal protein L20-A
- Chain f
- 60S ribosomal protein L33-A
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