IL_7Z3O_020

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAU*ACUC

Length

7 nucleotides

Bulged bases

7Z3O|1|1|C|471

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_020 not in the Motif Atlas

Geometric match to IL_8C3A_468

Geometric discrepancy: 0.3959

The information below is about IL_8C3A_468

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_10289.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

237

Unit IDs

7Z3O|1|1|G|445
7Z3O|1|1|A|446
7Z3O|1|1|U|447
*
7Z3O|1|1|A|470
7Z3O|1|1|C|471
7Z3O|1|1|U|472
7Z3O|1|1|C|473

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain LF

60S ribosomal protein l7-like protein

Chain Lq

Putative 60S ribosomal protein