3D structure

PDB id
7Z3O (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
UGAAG*UGGAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7Z3O_033 not in the Motif Atlas
Homologous match to IL_8C3A_033
Geometric discrepancy: 0.121
The information below is about IL_8C3A_033
Detailed Annotation
Triple sheared
Broad Annotation
No text annotation
Motif group
IL_95716.2
Basepair signature
cWW-cWW-tHS-tHS-tSH-cWW
Number of instances in this motif group
18

Unit IDs

7Z3O|1|1|U|816
7Z3O|1|1|G|817
7Z3O|1|1|A|818
7Z3O|1|1|A|819
7Z3O|1|1|G|820
*
7Z3O|1|1|U|837
7Z3O|1|1|G|838
7Z3O|1|1|G|839
7Z3O|1|1|A|840
7Z3O|1|1|G|841

Current chains

Chain 1
26S rRNA

Nearby chains

Chain LA
60S ribosomal protein L2-like protein
Chain LR
Ribosomal protein L19
Chain Lp
60S ribosomal protein L43-like protein

Coloring options:


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