IL_7Z3O_046

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

ACUCG*CAU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_046 not in the Motif Atlas

Geometric match to IL_5TBW_145

Geometric discrepancy: 0.2845

The information below is about IL_5TBW_145

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_54650.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

7Z3O|1|1|A|995
7Z3O|1|1|C|996
7Z3O|1|1|U|997
7Z3O|1|1|C|998
7Z3O|1|1|G|999
*
7Z3O|1|1|C|1018
7Z3O|1|1|A|1019
7Z3O|1|1|U|1020

Current chains

Chain 1

26S rRNA

Nearby chains

Chain LD

60S ribosomal protein l5-like protein