IL_7Z3O_095

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CCAAAUGCCUCG*CGCG

Length

16 nucleotides

Bulged bases

7Z3O|1|1|A|2244, 7Z3O|1|1|C|2250, 7Z3O|1|1|C|2269

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Z3O_095 not in the Motif Atlas

Homologous match to IL_5TBW_090

Geometric discrepancy: 0.1308

The information below is about IL_5TBW_090

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_66080.1

Basepair signature

cWW-cWW-tSH-L-cWW-L

Number of instances in this motif group

5

Unit IDs

7Z3O|1|1|C|2240
7Z3O|1|1|C|2241
7Z3O|1|1|A|2242
7Z3O|1|1|A|2243
7Z3O|1|1|A|2244
7Z3O|1|1|U|2245
7Z3O|1|1|G|2246
7Z3O|1|1|C|2247
7Z3O|1|1|C|2248
7Z3O|1|1|U|2249
7Z3O|1|1|C|2250
7Z3O|1|1|G|2251
*
7Z3O|1|1|C|2267
7Z3O|1|1|G|2268
7Z3O|1|1|C|2269
7Z3O|1|1|G|2270

Current chains

Chain 1

26S rRNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain Ln

60S ribosomal protein L41-A